💥 Redesign private sub-module system

~/.doom.d/modules is now a full module tree, like ~/.emacs.d/modules.
Symlinks are no longer involved.

Private modules can now shadow Doom modules. e.g.
~/.doom.d/modules/lang/org will take precendence over
~/.emacs.d/modules/lang/org.

Also, made doom--*-load-path variables public (e.g. doom--site-load-path
=> doom-site-load-path), and rearranged the load-path for a 10-15%
startup boost.

core/core-lib.el

@@ -1,6 +1,6 @@
 ;;; core-lib.el -*- lexical-binding: t; -*-
 
-(let ((load-path doom--site-load-path))
+(let ((load-path doom-site-load-path))
   (require 'subr-x)
   (require 'cl-lib)
   (require 'map))